12–17 Jul 2026
University of Graz
Europe/Vienna timezone

Unifying in vitro elongation kinetics of cytoplasmic intermediate filaments across microscopy and static light scattering

MS45-03
16 Jul 2026, 15:50
20m
15.06 - HS (University of Graz)

15.06 - HS

University of Graz

92
Minisymposium Talk Numerical, Computational, and Data-Driven Methods Data-driven modeling in biology and medicine

Speaker

Stephanie Portet (Department of Mathematics, University of Manitoba, Winnipeg, MB, Canada)

Description

Intermediate filament (IF) elongation is driven by the longitudinal annealing of semiflexible biopolymers. Although in vitro assembly is routinely characterized by microscopy and static light scattering (SLS), a unified theoretical framework linking these complementary measurements is lacking. Here, we bridge these modalities using a Smoluchowski coagulation model for semiflexible polymers. We show that a single intrinsic bimolecular rate parameter, $k_0$, governs assembly dynamics, linking microscopic filament length distributions to macroscopic dual-wavelength SLS intensity ratios. Exploiting the model's time-rescaling properties, we derive computationally efficient empirical scaling laws describing sublinear filament growth ($\sim t^{0.89}$), the transition from lognormal to gamma length distributions, and saturating SLS signal ratios. Validation with vimentin and desmin datasets reveals that thermal bending fluctuations largely offset hydrodynamic drag, producing a weakly homogeneous association kernel. The framework reduces computation from hours to seconds while enabling rapid parameter estimation and quantitative predictions across experimental modalities.

Author

Stephanie Portet (Department of Mathematics, University of Manitoba, Winnipeg, MB, Canada)

Co-authors

Ben Fabry (Department of Physics, Friedrich-Alexander-Universitӓt Erlangen-Nürnberg, Germany) Harald Herrmann (Institute of Neuropathology, University Hospital Erlangen, FAU, Germany) Lovis Schween (Department of Physics, Friedrich-Alexander-Universitӓt Erlangen-Nürnberg, Germany) Norbert Mücke (Division of Chromatin Networks, DKFZ, Heidelberg, Germany)

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